Genome replication.
RNA-dependant RNA polymerase copies the entire (+) sense RNA genome as a complementary (-) antisense RNA (3' to 5').
It then copies the entire (-) antisense RNA as complementary (+) sense RNA genomes (3' to 5'). See arrows. Also see Fig. 4.
Transcription of the various viral mRNAs coding for viral proteins.
RNA polymerase copies a portion of the (+) sense RNA genome until it comes to one of the transcription regulatory sequences (TRS) along the molecule, at which time it jumps all the way to the leaderTRS at the 5' end, thus generating various short subgenomic (-) antisense RNAs of varying length. RNA polymerase then transcribes these subgenomic (-) antisense RNAs to (+) sense mRNAs coding for the various viral structural proteins and enzymes.
Last updated: Feb., 2021
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Gary Kaiser